CryoSPARC v4.4.1

The volume viewer now supports many more types of volume outputs: map, map_sharp, map_aligned, map_half_A, map_half_B, map_sym, map_sym_sharp, map_filtered, map_3DFSC

Attempting to unarchive a project will now fail if the directory specified does not contain a the same project UID that is being unarchived. The target project directory’s project.json file is checked to see if it matches the UID of the project selected in the UI.

Exposure Group Utilities now creates the exposure and particle output groups at build time rather than run time, enabling the job to be used in Workflows.

Align 3D’s volume output group now outputs a map output, identical to the map_aligned output, for enabling drag-and-drop connection to refinement job input groups.

The Benchmark job now includes a new class3D-small benchmark to test minimum supported hardware specs (32GB DRAM, 11GB VRAM). GPU benchmarks also now allow any specific benchmark to fail without halting the overall benchmark job.

Fixed an issue where the default blueprint ‘2D Classification (Small Particle)’ would fail due to a missing custom parameter.

Fixed an issue which caused the 3DVA Display job to sometimes duplicate upstream 3DVA component slots at build time.

Fixed an issue causing Remove Duplicate Particles and 2D Classification to occasionally fail with an AssertionError.

Fixed an issue where the ability to toggle display of denoised micrograph within Exposure Curation was not showing.

Fixed an issue which caused I/O error messages to be displayed without the specific reason for the failure.

Fixed an issue which could cause reference based motion correction to crash when a defect file was in use.

Fixed an issue where reference based motion correction could crash with a message about the variable ‘uid’ being referenced before assignment.

Increased memory limit per movie for reference based motion correction from 100 GB to the machine’s physical RAM.

Fixed an issue where thumbnails were not being updated when manually rejecting exposures in the exposure curation cards view with a filter set.

Project level parameter defaults are longer reset when creating a job from a blueprint (all parameters are still reset when applying a blueprint to an existing job).

Template picking in Live no longer fails when only one template is selected.

External dependencies that were removed in older versions of CryoSPARC are no longer installed.

Fixed an issue where all required directories were not being checked for existence when restoring from backup.

MONGO_EXTRA_FLAGS is no longer included in the default configuration file after installation.