CryoSPARC v5.0.3
If you are updating to v5.0.3 from a CryoSPARC v4 version, please see the full v5.0 changelog, update instructions, and compatibility notes here: cryosparc.com/updates/v5.0
Jobs with integer parameter values larger than 8 bytes now pass validation. For users who updated to v5.0.0-v5.0.2: projects detached during upgrade due to OverflowError: MongoDB can only handle up to 8-byte ints can now be attached in v5.0.3.
Projects with empty project titles now pass validation. For users who updated to v5.0.0-v5.0.2: projects detached during upgrade due to String should have at least 1 character [type=string_too_short, input_value='', input_type=str] can now be attached in v5.0.3.
Fixed an issue where users could not edit the titles of jobs/workspaces/projects in projects that had been shared with them.
Correctly forward environment variables such as LD_LIBRARY_PATH to cluster submission commands, preventing failure.
Fixed an issue where SSD reserve would default to 0, instead of 10GB, for connected targets and clusters.
Fixed an issue where a launched job is marked as failed when using some terminal shells, if there is extra output in the shell configuration.
Fixed an issue where jobs that were cleared quickly after queuing were still launched.
For jobs created programatically or by CryoSPARC Live, the created_by_user_id field is now correctly set.
Homogeneous Ab-initio Refinement no longer fails with KeyError when run with helical data.
Fixed an issue where imported micrographs would display as too light or too dark in interactive jobs.
Extra "Random Seed Default" parameter no longer appears on newly-created Blueprints.
Fixed an issue where, under some conditions, a job fails with "unknown dataset field error" if two slots with the same type are connected.
Fixed an issue where .cs and .csg filenames for exported jobs or outputs would incorrectly differ.
Fixed an issue where a job would attempt to connect to the wrong master hostname if the master environment is active when the job launches.
cryosparcm service management commands no longer fail when running from a working directory that the current user does not have permission to access.
Extensive Validation no longer fails with an error indicating a checksum mismatch, when test data is downloaded automatically by CryoSPARC.
Exposure Sets Tool no longer fails on intersect action when only micrographs (not movies) are connected.
Fixed an issue where session restoration would crash due to missing a related notification.
Fixed an issue in 2D Classification causing it to crash when the output of intermediate plots was disabled.
Fixed an issue where Split Volumes Group did not correctly passthrough upstream particle metadata.